.. -*- coding: utf-8 -*- .. _ITP-format: ===================================== ITP (GROMACS portable topology files) ===================================== .. include:: classes/ITP.txt A ITP_ file is a portable topology file. .. important:: Unlike :ref:`TPR ` files, atom ``ids`` and residues ``resids`` in ITP files are indexed from 1. This means that a TPR file created from your ITP files will have *different* numbering in MDAnalysis than the ITP file. .. _ITP: http://manual.gromacs.org/current/reference-manual/topologies/topology-file-formats.html#molecule-itp-file